Removing MSDOS based Start-Up 1.0 freeware

I recently downloaded a couple of freeware programs. One was CWSHREDDER from the 'sypware' menu on this home page, I removed it by deleting the .exe file as per the softwares intsructions... The other software program was from the 'admin tools' menu also from this sites homepage. The program is Start-Up by ExtraMile Software, it had no instructions for deleting and no unistall feature built into the program and the
program was not listed under the add/remove program. So I dragged the progams into my trash (under their properties they were listed as being on the desktop, not a shortcut), emptied the
trash, did a search for its files and deleted the files and restarted. Now when I start my
computer in safe mode and right hand click the 'my computer' logo and
go>properties>performace...I get a message that says "Real mode driver or
memory resident program loaded in config.sys or autoexec.bat file" and when I
click for more info I get..."Drive X is using an MS-DOS mode file system, a
driver listed in the Config.sys file" and also "Compatibility mode reduces
overall system performace"...How do I get rid of this program. I am not a
wizkid at computers but I can follow instructions, I could use some help on
how to rid of this program off my computer as ironically my goal was to free up some system resources but now more system resources are being used than ever.

 

Which OS?Looks like windows cant find your IDE(hd) drivers and is using MSDOS mode file.But this may be normal for safe mode.

 

http://support.microsoft.com/?kbid=130179
You only need to be concernd if the error happens at normal times and not safe mode.